Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PAAD rs3118227 chr16:68734855 G/A 7.18E-5 175 16.17 14.33 5.97 KM Plot
PAAD rs3128767 chr4:2405454 C/A 0 171 0.4 16.07 15.47 KM Plot
PAAD rs3128768 chr4:2405197 A/G 0 178 15.37 16.1 0.4 KM Plot
PAAD rs3128769 chr4:2405176 G/T 0 178 0.4 16.1 15.37 KM Plot
PAAD rs3128770 chr4:2405144 C/T 0 178 0.4 16.1 15.37 KM Plot
PAAD rs3128771 chr4:2404812 G/C 0 178 0.4 16.1 15.37 KM Plot
PAAD rs3128772 chr4:2404673 T/C 0 178 0.4 16.1 15.37 KM Plot
PAAD rs3128773 chr4:2404274 G/A 0 177 0.4 16.07 15.37 KM Plot
PAAD rs3128775 chr4:2404150 T/C 0 178 0.4 16.1 15.37 KM Plot
PAAD rs3128777 chr4:2403871 G/A 0 178 0.4 16.1 15.37 KM Plot
PAAD rs3128778 chr4:2402474 C/T 0 171 0.4 16.37 15.33 KM Plot
PAAD rs3128779 chr4:2402465 G/A 0 172 0.4 16.37 15.37 KM Plot
PAAD rs3128780 chr4:2402228 T/C 0 178 0.4 16.1 15.37 KM Plot
PAAD rs3128781 chr4:2402019 C/T 0 178 0.4 16.1 15.37 KM Plot
PAAD rs3128782 chr4:2401570 C/T 0 178 0.4 16.1 15.37 KM Plot